I had a head ache also on about the third day. I cut the dose back to half for a few days and drank LOTS of water. I went back to the full dose and was fine after that...no more head ache.
Headache is one of the parasite die-off symptoms. You can cut back on your dose to lessen it, or wait it out, but don't worry about cutting back - it still works, just more slowly. Lots of water will help prevent this.