Homeopathics don't normally interfere with allopathic medicine.
However as symptoms change/improve hopefully, you will have to modify the particular Homeopathics.
It sounds more like STD to me, maybe not acute though, genital warts can do this even.
Practicing Kegels, an ampallang/apadravya piercing and my girlfriend getting a "Princess Albertina" piercing has taken us to the "next" level.